Provides some utility functions for the alignment configurations.
Provides seqan3::alignment_result.
Configures the alignment result to output the alignment.
Definition: align_config_output.hpp:171
~output_alignment()=default
Defaulted.
constexpr output_alignment & operator=(output_alignment const &)=default
Defaulted.
constexpr output_alignment()=default
Defaulted.
constexpr output_alignment & operator=(output_alignment &&)=default
Defaulted.
constexpr output_alignment(output_alignment const &)=default
Defaulted.
constexpr output_alignment(output_alignment &&)=default
Defaulted.
Configures the alignment result to output the begin positions.
Definition: align_config_output.hpp:131
constexpr output_begin_position & operator=(output_begin_position &&)=default
Defaulted.
constexpr output_begin_position()=default
Defaulted.
constexpr output_begin_position & operator=(output_begin_position const &)=default
Defaulted.
constexpr output_begin_position(output_begin_position &&)=default
Defaulted.
constexpr output_begin_position(output_begin_position const &)=default
Defaulted.
~output_begin_position()=default
Defaulted.
Configures the alignment result to output the end position.
Definition: align_config_output.hpp:87
constexpr output_end_position(output_end_position const &)=default
Defaulted.
constexpr output_end_position(output_end_position &&)=default
Defaulted.
~output_end_position()=default
Defaulted.
constexpr output_end_position()=default
Defaulted.
constexpr output_end_position & operator=(output_end_position const &)=default
Defaulted.
constexpr output_end_position & operator=(output_end_position &&)=default
Defaulted.
Configures the alignment result to output the score.
Definition: align_config_output.hpp:43
constexpr output_score & operator=(output_score const &)=default
Defaulted.
constexpr output_score()=default
Defaulted.
constexpr output_score(output_score const &)=default
Defaulted.
constexpr output_score & operator=(output_score &&)=default
Defaulted.
constexpr output_score(output_score &&)=default
Defaulted.
~output_score()=default
Defaulted.
Configures the alignment result to output the id of the first sequence.
Definition: align_config_output.hpp:211
constexpr output_sequence1_id & operator=(output_sequence1_id &&)=default
Defaulted.
constexpr output_sequence1_id(output_sequence1_id const &)=default
Defaulted.
constexpr output_sequence1_id()=default
Defaulted.
~output_sequence1_id()=default
Defaulted.
constexpr output_sequence1_id(output_sequence1_id &&)=default
Defaulted.
constexpr output_sequence1_id & operator=(output_sequence1_id const &)=default
Defaulted.
Configures the alignment result to output the id of the second sequence.
Definition: align_config_output.hpp:251
constexpr output_sequence2_id & operator=(output_sequence2_id &&)=default
Defaulted.
constexpr output_sequence2_id(output_sequence2_id &&)=default
Defaulted.
constexpr output_sequence2_id & operator=(output_sequence2_id const &)=default
Defaulted.
constexpr output_sequence2_id(output_sequence2_id const &)=default
Defaulted.
constexpr output_sequence2_id()=default
Defaulted.
~output_sequence2_id()=default
Defaulted.
Provides concepts for core language types and relations that don't have concepts in C++20 (yet).
align_config_id
An internal enum to check for a consistent configuration object.
Definition: detail.hpp:24
@ output_score
ID for the score output option.
@ output_sequence2_id
ID for the sequence2 id output option.
@ output_alignment
ID for the alignment output option.
@ output_end_position
ID for the end position output option.
@ output_sequence1_id
ID for the sequence1 id output option.
@ output_begin_position
ID for the begin position output option.
A special sub namespace for the alignment configurations.
Definition: align_config_band.hpp:25
Provides seqan3::pipeable_config_element.
Adds pipe interface to configuration elements.
Definition: pipeable_config_element.hpp:32